STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdx4Caudal type homeobox 4. (271 aa)    
Predicted Functional Partners:
ogg1
8-oxoguanine DNA glycosylase.
      
 0.603
ace
Angiotensin-converting enzyme.
      
 0.585
pex11g
Peroxisomal biogenesis factor 11 gamma.
      
 0.554
ENSAOCP00000022978
Uncharacterized protein.
      
 0.551
spata22
Spermatogenesis associated 22.
      
 0.539
ENSAOCP00000019290
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.524
fgf4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.524
LOC111564615
TIMP metallopeptidase inhibitor 2b.
      
 0.483
TIMP2
TIMP metallopeptidase inhibitor 2.
      
 0.483
LOC111573076
Solute carrier family 7 member 3a.
   
  
 0.449
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.