Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdx4Caudal type homeobox 4. (271 aa)    
Predicted Functional Partners:
ogg1
8-oxoguanine DNA glycosylase.
      
 0.764
wnt11
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
  
 0.740
fgf5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.710
spata22
Spermatogenesis associated 22.
      
 0.709
kdsr
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.687
LOC111582028
POU domain protein.
    
 
 0.680
ENSAOCP00000019290
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.620
fgf4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.620
ace
Angiotensin-converting enzyme.
      
 0.617
pex11g
Peroxisomal biogenesis factor 11 gamma.
      
 0.617
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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