STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581982Golgi glycoprotein 1b. (1140 aa)    
Predicted Functional Partners:
LOC111564054
Golgi glycoprotein 1a.
  
  
 
0.900
fam234b
Family with sequence similarity 234 member B.
      
 0.553
Sell
Uncharacterized protein.
    
 0.544
LOC111573475
Selectin P.
    
 0.544
SELE
Selectin E.
    
 0.544
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
  
 0.524
LOC111572799
CUB and Sushi multiple domains 3a.
    
 0.524
fadd
Uncharacterized protein.
      
 0.504
cunh17orf75
Zgc:153240.
      
 0.485
rnaset2
Ribonuclease T2; Belongs to the RNase T2 family.
      
 0.485
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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