LOC111582511 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111582511

CREB binding protein b. (2425 aa)

Predicted Functional Partners:

LOC111570317

0.998

LOC111574397

0.998

LOC111577187

0.996

LOC111578362

0.991

kat2a

0.991

sp1

0.988

lef1

0.968

ctnnb1

0.967

LOC111584600

0.967

tcf7l1

0.961

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111570317	LOC111574397	ENSAOCP00000014681	ENSAOCP00000016355	E1A binding protein p300 b.	E1A binding protein p300 a.	0.901
LOC111570317	LOC111577187	ENSAOCP00000014681	ENSAOCP00000001385	E1A binding protein p300 b.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.997
LOC111570317	LOC111578362	ENSAOCP00000014681	ENSAOCP00000019830	E1A binding protein p300 b.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.992
LOC111570317	LOC111582511	ENSAOCP00000014681	ENSAOCP00000004064	E1A binding protein p300 b.	CREB binding protein b.	0.998
LOC111570317	LOC111584600	ENSAOCP00000014681	ENSAOCP00000017177	E1A binding protein p300 b.	Interferon regulatory factor 3.	0.959
LOC111570317	ctnnb1	ENSAOCP00000014681	ENSAOCP00000014206	E1A binding protein p300 b.	Catenin (cadherin-associated protein), beta 1.	0.958
LOC111570317	kat2a	ENSAOCP00000014681	ENSAOCP00000027604	E1A binding protein p300 b.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.992
LOC111570317	lef1	ENSAOCP00000014681	ENSAOCP00000026336	E1A binding protein p300 b.	Lymphoid enhancer-binding factor 1.	0.964
LOC111570317	sp1	ENSAOCP00000014681	ENSAOCP00000020916	E1A binding protein p300 b.	Sp1 transcription factor.	0.993
LOC111570317	tcf7l1	ENSAOCP00000014681	ENSAOCP00000015409	E1A binding protein p300 b.	Transcription factor 7 like 1b.	0.962
LOC111574397	LOC111570317	ENSAOCP00000016355	ENSAOCP00000014681	E1A binding protein p300 a.	E1A binding protein p300 b.	0.901
LOC111574397	LOC111577187	ENSAOCP00000016355	ENSAOCP00000001385	E1A binding protein p300 a.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.997
LOC111574397	LOC111578362	ENSAOCP00000016355	ENSAOCP00000019830	E1A binding protein p300 a.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.993
LOC111574397	LOC111582511	ENSAOCP00000016355	ENSAOCP00000004064	E1A binding protein p300 a.	CREB binding protein b.	0.998
LOC111574397	LOC111584600	ENSAOCP00000016355	ENSAOCP00000017177	E1A binding protein p300 a.	Interferon regulatory factor 3.	0.959
LOC111574397	ctnnb1	ENSAOCP00000016355	ENSAOCP00000014206	E1A binding protein p300 a.	Catenin (cadherin-associated protein), beta 1.	0.958
LOC111574397	kat2a	ENSAOCP00000016355	ENSAOCP00000027604	E1A binding protein p300 a.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.992
LOC111574397	lef1	ENSAOCP00000016355	ENSAOCP00000026336	E1A binding protein p300 a.	Lymphoid enhancer-binding factor 1.	0.964
LOC111574397	sp1	ENSAOCP00000016355	ENSAOCP00000020916	E1A binding protein p300 a.	Sp1 transcription factor.	0.993
LOC111574397	tcf7l1	ENSAOCP00000016355	ENSAOCP00000015409	E1A binding protein p300 a.	Transcription factor 7 like 1b.	0.962