Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC9Leucine rich repeat containing 9. (1238 aa)    
Predicted Functional Partners:
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.695
ENSAOCP00000025259
Uncharacterized protein.
      
 0.659
ak9
Adenylate kinase 9.
    
 
 0.605
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
    
 0.564
ENSAOCP00000030355
Uncharacterized protein.
    
 0.564
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.562
TYMP
Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
      
 0.543
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
   
 
 0.541
suox
Sulfite oxidase.
    
 
 0.527
LOC111565049
Im:7152348.
    
 0.502
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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