STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBL1NBL1, DAN family BMP antagonist. (189 aa)    
Predicted Functional Partners:
gdf5
Growth differentiation factor 5.
    
  0.903
LOC111575499
Anti-dorsalizing morphogenic protein.
    
  0.903
LOC111588709
Bone morphogenetic protein 7b.
    
  0.903
amh
Anti-Mullerian hormone.
    
  0.903
LOC111570498
Bone morphogenetic protein 7a.
    
  0.903
gdf6
Growth differentiation factor 6b.
    
  0.903
bmp6
Bone morphogenetic protein 6.
    
  0.903
bmp4
Bone morphogenetic protein 4.
    
  0.903
LOC111570811
Bone morphogenetic protein 16.
    
  0.903
bmp5
Bone morphogenetic protein 5.
    
  0.903
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.