Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111562560Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
LOC111562567
Uncharacterized protein.
     
 
0.900
LOC111572999
Ras-related GTP binding A.
    
 0.815
tyk2
Tyrosine-protein kinase.
    
 0.701
LOC111573731
Tyrosine-protein kinase.
    
 0.701
LOC111571538
Tyrosine-protein kinase.
    
 0.701
jak1
Tyrosine-protein kinase.
    
 0.701
jak3
Tyrosine-protein kinase.
    
 0.701
socs5
Suppressor of cytokine signaling 5b.
     
 0.554
LOC111576400
Signal transducer and activator of transcription.
     
 0.554
LOC111586815
Signal transducer and activator of transcription.
     
 0.554
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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