LOC111584529 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111584529

Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (464 aa)

Predicted Functional Partners:

oaz1

0.811

aass

0.811

LOC111566832

0.811

LOC111583745

0.797

srm

0.756

sms

0.715

ALDH18A1

0.708

LOC111579056

0.708

agmat

0.691

pbld

0.677

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	LOC111579056	ENSAOCP00000009218	ENSAOCP00000020262	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
ALDH18A1	LOC111584529	ENSAOCP00000009218	ENSAOCP00000004197	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.708
ALDH18A1	aass	ENSAOCP00000009218	ENSAOCP00000028033	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Aminoadipate-semialdehyde synthase.	0.695
ALDH18A1	agmat	ENSAOCP00000009218	ENSAOCP00000015874	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.	0.692
ALDH18A1	sms	ENSAOCP00000009218	ENSAOCP00000005154	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Spermine synthase.	0.696
ALDH18A1	srm	ENSAOCP00000009218	ENSAOCP00000014220	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Spermidine synthase; Belongs to the spermidine/spermine synthase family.	0.696
LOC111566832	LOC111584529	ENSAOCP00000029625	ENSAOCP00000004197	Ornithine decarboxylase antizyme 1b.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.811
LOC111579056	ALDH18A1	ENSAOCP00000020262	ENSAOCP00000009218	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
LOC111579056	LOC111584529	ENSAOCP00000020262	ENSAOCP00000004197	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.708
LOC111579056	aass	ENSAOCP00000020262	ENSAOCP00000028033	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Aminoadipate-semialdehyde synthase.	0.695
LOC111579056	agmat	ENSAOCP00000020262	ENSAOCP00000015874	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.	0.692
LOC111579056	sms	ENSAOCP00000020262	ENSAOCP00000005154	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Spermine synthase.	0.696
LOC111579056	srm	ENSAOCP00000020262	ENSAOCP00000014220	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Spermidine synthase; Belongs to the spermidine/spermine synthase family.	0.696
LOC111583745	LOC111584529	ENSAOCP00000003182	ENSAOCP00000004197	Ornithine decarboxylase antizyme 2a.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.797
LOC111583745	sms	ENSAOCP00000003182	ENSAOCP00000005154	Ornithine decarboxylase antizyme 2a.	Spermine synthase.	0.498
LOC111584529	ALDH18A1	ENSAOCP00000004197	ENSAOCP00000009218	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.708
LOC111584529	LOC111566832	ENSAOCP00000004197	ENSAOCP00000029625	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Ornithine decarboxylase antizyme 1b.	0.811
LOC111584529	LOC111579056	ENSAOCP00000004197	ENSAOCP00000020262	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.708
LOC111584529	LOC111583745	ENSAOCP00000004197	ENSAOCP00000003182	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Ornithine decarboxylase antizyme 2a.	0.797
LOC111584529	aass	ENSAOCP00000004197	ENSAOCP00000028033	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Aminoadipate-semialdehyde synthase.	0.811