LOC111579980 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111579980	SUMF2	ENSAOCP00000004202	ENSAOCP00000010821	Si:dkey-174i8.1.	Sulfatase modifying factor 2.	0.641
LOC111579980	arsg	ENSAOCP00000004202	ENSAOCP00000001570	Si:dkey-174i8.1.	Arylsulfatase G.	0.565
LOC111579980	arsk	ENSAOCP00000004202	ENSAOCP00000019256	Si:dkey-174i8.1.	Arylsulfatase family, member K.	0.644
LOC111579980	gss	ENSAOCP00000004202	ENSAOCP00000028632	Si:dkey-174i8.1.	Glutathione synthetase.	0.697
LOC111579980	ids	ENSAOCP00000004202	ENSAOCP00000020331	Si:dkey-174i8.1.	Iduronate 2-sulfatase.	0.594
LOC111579980	med14	ENSAOCP00000004202	ENSAOCP00000029031	Si:dkey-174i8.1.	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.620
LOC111579980	med6	ENSAOCP00000004202	ENSAOCP00000010317	Si:dkey-174i8.1.	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.570
LOC111579980	med7	ENSAOCP00000004202	ENSAOCP00000026584	Si:dkey-174i8.1.	Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.	0.563
LOC111579980	sts	ENSAOCP00000004202	ENSAOCP00000018754	Si:dkey-174i8.1.	Steroid sulfatase (microsomal), isozyme S.	0.566
LOC111579980	sumf1	ENSAOCP00000004202	ENSAOCP00000028280	Si:dkey-174i8.1.	Sulfatase modifying factor 1.	0.780
SUMF2	LOC111579980	ENSAOCP00000010821	ENSAOCP00000004202	Sulfatase modifying factor 2.	Si:dkey-174i8.1.	0.641
SUMF2	arsg	ENSAOCP00000010821	ENSAOCP00000001570	Sulfatase modifying factor 2.	Arylsulfatase G.	0.728
SUMF2	arsk	ENSAOCP00000010821	ENSAOCP00000019256	Sulfatase modifying factor 2.	Arylsulfatase family, member K.	0.856
SUMF2	ids	ENSAOCP00000010821	ENSAOCP00000020331	Sulfatase modifying factor 2.	Iduronate 2-sulfatase.	0.406
SUMF2	sts	ENSAOCP00000010821	ENSAOCP00000018754	Sulfatase modifying factor 2.	Steroid sulfatase (microsomal), isozyme S.	0.704
SUMF2	sumf1	ENSAOCP00000010821	ENSAOCP00000028280	Sulfatase modifying factor 2.	Sulfatase modifying factor 1.	0.985
arsg	LOC111579980	ENSAOCP00000001570	ENSAOCP00000004202	Arylsulfatase G.	Si:dkey-174i8.1.	0.565
arsg	SUMF2	ENSAOCP00000001570	ENSAOCP00000010821	Arylsulfatase G.	Sulfatase modifying factor 2.	0.728
arsg	arsk	ENSAOCP00000001570	ENSAOCP00000019256	Arylsulfatase G.	Arylsulfatase family, member K.	0.777
arsg	med14	ENSAOCP00000001570	ENSAOCP00000029031	Arylsulfatase G.	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.789