Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zfhx3Homeobox domain-containing protein. (276 aa)    
Predicted Functional Partners:
ENSAOCP00000022029
Uncharacterized protein.
 
      0.708
LOC111578471
Runt-related transcription factor.
     
 0.663
runx2
Runt-related transcription factor.
     
 0.646
LOC111562778
Runt-related transcription factor.
     
 0.646
med12
Mediator complex subunit 12.
      
 0.585
LOC111581736
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.561
ENSAOCP00000008932
Runt domain-containing protein.
     
 0.560
LOC111578905
Ataxin 3.
      
 0.430
lef1
Lymphoid enhancer-binding factor 1.
   
  
 0.415
prr16
Proline rich 16.
      
 0.406
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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