Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
micall2Mical-like 2a. (760 aa)    
Predicted Functional Partners:
LOC111581260
Multiple EGF-like-domains 8.
    
 0.932
RAB8A
RAB8A, member RAS oncogene family.
    
 0.932
rab13
Uncharacterized protein.
    
 0.932
LOC111567953
Uncharacterized protein.
    
 0.932
LOC111582786
Uncharacterized protein.
    
 
0.920
actn1
Actinin, alpha 1.
    
 
0.920
LOC111588149
Uncharacterized protein.
  
  
 
0.905
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.492
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.492
rab12
RAB12, member RAS oncogene family.
    
 0.416
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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