STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
    
 0.989
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.986
LOC111569819
FIP1 like 1b (S. cerevisiae).
    
 0.976
LOC111585424
WD repeat domain 82.
   
 0.972
LOC111568125
WD_REPEATS_REGION domain-containing protein.
   
 0.972
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.970
LOC111587228
Cleavage and polyadenylation specific factor 3.
   
 0.970
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.962
pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.943
sympk
Symplekin.
   
 
 0.943
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.