Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (539 aa)    
Predicted Functional Partners:
tollip
Toll interacting protein.
   
 
 0.847
myo6
Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.719
cuedc1
CUE domain containing 1b.
    
   0.719
LOC111577953
Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.719
cmtr1
Cap methyltransferase 1.
   
  
 0.553
crocc
Uncharacterized protein.
      
 0.543
rps27a
Ribosomal protein S27a.
    
   0.532
LOC111575922
RAB, member of RAS oncogene family-like 2.
    
 0.532
ewsr1
EWS RNA-binding protein 1b.
      
 0.514
arl15
ADP-ribosylation factor-like 15a.
    
 0.492
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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