Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nrarpNOTCH regulated ankyrin repeat protein a. (112 aa)    
Predicted Functional Partners:
LOC111574876
Recombination signal binding protein for immunoglobulin kappa J region a.
   
 0.948
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.948
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.929
LOC111569803
Notch receptor 1a.
    
 0.857
notch1
Notch receptor 1b.
    
 0.857
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
      
 0.609
bhlhe23
Basic helix-loop-helix family, member e23.
      
 0.544
LOC111582077
TUB like protein 4a; Belongs to the TUB family.
      
 0.529
LOC111566500
TUB like protein 4b; Belongs to the TUB family.
      
 0.529
LOC111584090
Uncharacterized protein.
    
 0.510
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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