Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581955Uncharacterized protein. (1210 aa)    
Predicted Functional Partners:
Cep97
Uncharacterized protein.
   
 0.983
cep290
Centrosomal protein 290.
    
 0.975
cep76
Centrosomal protein 76.
    
 0.950
ccnf
Cyclin F; Belongs to the cyclin family.
    
 
 0.941
cenpj
Centromere protein J.
   
 0.854
neurl4
Neuralized E3 ubiquitin protein ligase 4.
    
 
 0.847
plk4
Polo-like kinase 4 (Drosophila).
    
 0.837
LOC111570067
Centrin 4.
    
 0.820
LOC111565572
Centrin, EF-hand protein, 2.
    
 0.820
cep135
Centrosomal protein 135.
   
 0.798
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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