STOML2 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

STOML2

Stomatin like 2. (355 aa)

Predicted Functional Partners:

phb

0.948

LOC111576813

0.804

PHB2

0.804

LOC111568602

0.804

yme1l1

0.723

LOC111588097

0.723

dele1

0.697

lamtor1

0.685

LOC111572763

0.669

parl

0.669

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111568602	LOC111572763	ENSAOCP00000017669	ENSAOCP00000014323	Prohibitin.	Presenilin associated, rhomboid-like a.	0.526
LOC111568602	LOC111588097	ENSAOCP00000017669	ENSAOCP00000025745	Prohibitin.	YME1-like 1b.	0.644
LOC111568602	STOML2	ENSAOCP00000017669	ENSAOCP00000004355	Prohibitin.	Stomatin like 2.	0.804
LOC111568602	dele1	ENSAOCP00000017669	ENSAOCP00000030591	Prohibitin.	Uncharacterized protein.	0.611
LOC111568602	parl	ENSAOCP00000017669	ENSAOCP00000025842	Prohibitin.	Rhomboid domain-containing protein.	0.526
LOC111568602	phb	ENSAOCP00000017669	ENSAOCP00000018259	Prohibitin.	Prohibitin.	0.992
LOC111568602	yme1l1	ENSAOCP00000017669	ENSAOCP00000018313	Prohibitin.	YME1-like 1a.	0.644
LOC111572763	LOC111568602	ENSAOCP00000014323	ENSAOCP00000017669	Presenilin associated, rhomboid-like a.	Prohibitin.	0.526
LOC111572763	LOC111576813	ENSAOCP00000014323	ENSAOCP00000014547	Presenilin associated, rhomboid-like a.	Prohibitin.	0.526
LOC111572763	LOC111588097	ENSAOCP00000014323	ENSAOCP00000025745	Presenilin associated, rhomboid-like a.	YME1-like 1b.	0.727
LOC111572763	PHB2	ENSAOCP00000014323	ENSAOCP00000015813	Presenilin associated, rhomboid-like a.	Prohibitin.	0.526
LOC111572763	STOML2	ENSAOCP00000014323	ENSAOCP00000004355	Presenilin associated, rhomboid-like a.	Stomatin like 2.	0.669
LOC111572763	phb	ENSAOCP00000014323	ENSAOCP00000018259	Presenilin associated, rhomboid-like a.	Prohibitin.	0.502
LOC111572763	yme1l1	ENSAOCP00000014323	ENSAOCP00000018313	Presenilin associated, rhomboid-like a.	YME1-like 1a.	0.727
LOC111576813	LOC111572763	ENSAOCP00000014547	ENSAOCP00000014323	Prohibitin.	Presenilin associated, rhomboid-like a.	0.526
LOC111576813	LOC111588097	ENSAOCP00000014547	ENSAOCP00000025745	Prohibitin.	YME1-like 1b.	0.644
LOC111576813	PHB2	ENSAOCP00000014547	ENSAOCP00000015813	Prohibitin.	Prohibitin.	0.900
LOC111576813	STOML2	ENSAOCP00000014547	ENSAOCP00000004355	Prohibitin.	Stomatin like 2.	0.804
LOC111576813	dele1	ENSAOCP00000014547	ENSAOCP00000030591	Prohibitin.	Uncharacterized protein.	0.611
LOC111576813	parl	ENSAOCP00000014547	ENSAOCP00000025842	Prohibitin.	Rhomboid domain-containing protein.	0.526