Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kizKizuna centrosomal protein. (672 aa)    
Predicted Functional Partners:
sclt1
Sodium channel and clathrin linker 1.
    
  0.958
fancm
Helicase C-terminal domain-containing protein.
    
 
 0.712
ENSAOCP00000002808
Helicase ATP-binding domain-containing protein.
    
 
 0.712
tmtc4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 0.636
LOC111585467
Uncharacterized protein.
    
  0.628
ENSAOCP00000012292
PR domain containing 1b, with ZNF domain.
    
  0.628
prdm1
PR domain containing 1a, with ZNF domain.
    
  0.628
ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
    
 
 0.594
mfhas1
Malignant fibrous histiocytoma amplified sequence 1.
    
 0.569
cuedc2
CUE domain containing 2.
      
 0.502
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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