Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111588736Uncharacterized protein. (771 aa)    
Predicted Functional Partners:
il17c
Uncharacterized protein.
     
  0.900
LOC111568681
Si:ch211-207e14.4.
    
 0.720
il17rd
Interleukin 17 receptor D.
    
 0.720
LOC111584412
SEFIR domain-containing protein.
      
 0.705
LOC111567057
SEFIR domain-containing protein.
    
 0.627
LOC111583635
SEFIR domain-containing protein.
    
 0.627
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
      
 0.614
tp53inp2
Uncharacterized protein.
      
 0.608
LOC111578307
Uncharacterized protein.
  
   
 0.589
LOC111588717
Vestigial-like family member 4a.
      
 0.551
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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