Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ENSAOCP00000004441Papilin a, proteoglycan-like sulfated glycoprotein. (735 aa)    
Predicted Functional Partners:
mb
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
    
 0.504
ngb
Neuroglobin; Belongs to the globin family.
    
 0.444
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
      
 0.438
r3hcc1
R3H domain and coiled-coil containing 1.
      
 0.426
smg7
SMG7 nonsense mediated mRNA decay factor.
      
 0.415
thsd1
Thrombospondin, type I, domain containing 1.
      
 0.409
LOC111575256
Si:dkey-7k24.5.
    
 
 0.406
LOC111577299
Si:ch211-165b10.3.
    
 0.404
amph
Amphiphysin.
      
 0.402
LOC111564486
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.401
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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