Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr83WD repeat domain containing 83. (317 aa)    
Predicted Functional Partners:
dhx35
DEAH-box helicase 35.
   
 
 0.978
sf3b4
Splicing factor 3b, subunit 4.
    
 
 0.972
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
   
 0.968
bud31
BUD31 homolog.
    
 
 0.965
prpf8
Pre-mRNA processing factor 8.
    
 
 0.965
aqr
Aquarius intron-binding spliceosomal factor.
    
 
 0.959
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
  0.954
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.952
cwf19l2
CWF19 like cell cycle control factor 2.
   
 
 0.945
ENSAOCP00000005520
DUF1604 domain-containing protein.
    
 
 0.928
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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