Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111567785Integrin beta; Belongs to the integrin beta chain family. (798 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
    
 0.979
LOC111566051
Uncharacterized protein.
    
 0.978
LOC111588666
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.973
LOC111581516
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
   
 0.973
itga3
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
   
 0.968
itga2
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family.
   
 0.966
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
   
 0.962
itga4
Integrin alpha 4; Belongs to the integrin alpha chain family.
   
 0.962
LOC111579833
Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.961
LOC111567389
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.961
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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