LOC111562527 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111562527	LOC111563269	ENSAOCP00000004539	ENSAOCP00000000178	Fragile X mental retardation, autosomal homolog 2.	Cell cycle associated protein 1a.	0.799
LOC111562527	LOC111563426	ENSAOCP00000004539	ENSAOCP00000027974	Fragile X mental retardation, autosomal homolog 2.	SERPINE1 mRNA binding protein 1a.	0.724
LOC111562527	LOC111587365	ENSAOCP00000004539	ENSAOCP00000032396	Fragile X mental retardation, autosomal homolog 2.	SERPINE1 mRNA binding protein 1b.	0.724
LOC111562527	caprin1	ENSAOCP00000004539	ENSAOCP00000001560	Fragile X mental retardation, autosomal homolog 2.	Cell cycle associated protein 1b.	0.799
LOC111562527	cyfip1	ENSAOCP00000004539	ENSAOCP00000026321	Fragile X mental retardation, autosomal homolog 2.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.820
LOC111562527	cyfip2	ENSAOCP00000004539	ENSAOCP00000010526	Fragile X mental retardation, autosomal homolog 2.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.899
LOC111562527	fmr1	ENSAOCP00000004539	ENSAOCP00000004219	Fragile X mental retardation, autosomal homolog 2.	Fragile X mental retardation 1.	0.856
LOC111562527	nufip2	ENSAOCP00000004539	ENSAOCP00000023821	Fragile X mental retardation, autosomal homolog 2.	Nuclear FMR1 interacting protein 2.	0.748
LOC111562527	tdrd3	ENSAOCP00000004539	ENSAOCP00000029281	Fragile X mental retardation, autosomal homolog 2.	Tudor domain containing 3.	0.853
LOC111562527	top3b	ENSAOCP00000004539	ENSAOCP00000007708	Fragile X mental retardation, autosomal homolog 2.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.709
LOC111563269	LOC111562527	ENSAOCP00000000178	ENSAOCP00000004539	Cell cycle associated protein 1a.	Fragile X mental retardation, autosomal homolog 2.	0.799
LOC111563269	LOC111563426	ENSAOCP00000000178	ENSAOCP00000027974	Cell cycle associated protein 1a.	SERPINE1 mRNA binding protein 1a.	0.524
LOC111563269	LOC111587365	ENSAOCP00000000178	ENSAOCP00000032396	Cell cycle associated protein 1a.	SERPINE1 mRNA binding protein 1b.	0.524
LOC111563269	fmr1	ENSAOCP00000000178	ENSAOCP00000004219	Cell cycle associated protein 1a.	Fragile X mental retardation 1.	0.850
LOC111563269	nufip2	ENSAOCP00000000178	ENSAOCP00000023821	Cell cycle associated protein 1a.	Nuclear FMR1 interacting protein 2.	0.788
LOC111563426	LOC111562527	ENSAOCP00000027974	ENSAOCP00000004539	SERPINE1 mRNA binding protein 1a.	Fragile X mental retardation, autosomal homolog 2.	0.724
LOC111563426	LOC111563269	ENSAOCP00000027974	ENSAOCP00000000178	SERPINE1 mRNA binding protein 1a.	Cell cycle associated protein 1a.	0.524
LOC111563426	caprin1	ENSAOCP00000027974	ENSAOCP00000001560	SERPINE1 mRNA binding protein 1a.	Cell cycle associated protein 1b.	0.524
LOC111563426	fmr1	ENSAOCP00000027974	ENSAOCP00000004219	SERPINE1 mRNA binding protein 1a.	Fragile X mental retardation 1.	0.880
LOC111563426	tdrd3	ENSAOCP00000027974	ENSAOCP00000029281	SERPINE1 mRNA binding protein 1a.	Tudor domain containing 3.	0.518