STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585036Uncharacterized protein. (660 aa)    
Predicted Functional Partners:
ENSAOCP00000009825
Uncharacterized protein.
 
      0.873
LOC111563359
Uncharacterized protein.
 
      0.620
ENSAOCP00000018812
Uncharacterized protein.
 
      0.570
bbs9
Bardet-Biedl syndrome 9.
    
 0.536
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.496
bbs7
Bardet-Biedl syndrome 7.
    
 0.495
ttc8
Tetratricopeptide repeat domain 8.
    
 0.493
nbr1
NBR1 autophagy cargo receptor a.
    
 0.442
ubxn7
UBX domain protein 7.
    
  0.431
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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