Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000004550Si:ch1073-469d17.2. (90 aa)    
Predicted Functional Partners:
LOC111570921
Si:ch211-37e10.2.
  
     0.486
LOC111583225
Si:dkey-234i14.6.
  
     0.476
LOC111588100
Si:ch211-252f13.5.
  
     0.476
LOC111578557
Si:dkeyp-110a12.4.
  
     0.452
ENSAOCP00000015049
Si:ch73-105b23.6.
  
     0.437
LOC111580062
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
     0.420
LOC111570231
Si:ch73-382f3.1.
  
     0.405
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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