Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fat4Uncharacterized protein. (1350 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.670
fjx1
Four-jointed box kinase 1.
   
 
 0.613
LOC111582920
Uncharacterized protein.
    
 0.583
LOC111566303
Junction plakoglobin a.
    
 0.583
LOC111573771
Uncharacterized protein.
    
 0.583
ENSAOCP00000030690
Usher syndrome 1C.
   
 
 0.532
LOC111566522
Axin 2 (conductin, axil).
    
 
 0.517
AXIN2
Axin 2.
    
 
 0.517
yap1
Yes-associated protein 1.
    
 
 0.511
irx3
Iroquois homeobox 3a.
      
 0.511
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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