Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000004571Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
nup153
Nucleoporin 153.
   
 0.981
nup155
Nucleoporin 155.
   
 0.975
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.974
nup133
Nucleoporin 133.
   
 0.973
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.973
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.965
nup98
Nucleoporin 98.
   
 0.962
NUP214
Nucleoporin 214.
   
 0.956
LOC111570320
RAN GTPase activating protein 1a.
   
 0.956
LOC111574396
Ran GTPase activating protein 1b.
   
 0.956
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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