Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111563018Cyclin Y like 1; Belongs to the cyclin family. (340 aa)    
Predicted Functional Partners:
cdk14
Cyclin-dependent kinase 14; Belongs to the protein kinase superfamily.
   
 
 0.607
cdk15
Cyclin-dependent kinase 15; Belongs to the protein kinase superfamily.
   
 
 0.607
plekhm3
Pleckstrin homology domain containing, family M, member 3.
      
 0.602
ENSAOCP00000012498
Si:ch211-26b3.4.
      
 0.543
LOC111583102
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
   
 
 0.501
LOC111564970
Cyclin-dependent kinase 17.
   
 
 0.499
LOC111563818
Cyclin-dependent kinase 16.
   
 
 0.499
LOC111566781
Cyclin dependent kinase 17.
   
 
 0.499
ENSAOCP00000019155
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.499
LOC111586553
Uncharacterized protein.
   
 
 0.499
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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