STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwfVon Willebrand factor. (2842 aa)    
Predicted Functional Partners:
LOC111588741
Glycoprotein IX (platelet).
   
 0.951
ENSAOCP00000001260
Si:ch211-117l17.7.
   
 0.925
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.922
LOC111584896
Integrin beta; Belongs to the integrin beta chain family.
   
 0.922
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.800
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.730
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.728
LOC111567785
Integrin beta; Belongs to the integrin beta chain family.
   
 0.726
LOC111563530
Integrin beta; Belongs to the integrin beta chain family.
   
 0.726
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.721
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.