Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
greb1lGREB1 like retinoic acid receptor coactivator. (1949 aa)    
Predicted Functional Partners:
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
      
 0.705
LOC111582077
TUB like protein 4a; Belongs to the TUB family.
      
 0.705
dnd1
DND microRNA-mediated repression inhibitor 1.
      
 0.616
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.614
ENSAOCP00000004695
Nuclear receptor domain-containing protein.
    
 0.605
armt1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.605
LOC111586778
Uncharacterized protein.
    
 0.605
LOC111588998
Estrogen receptor 2a.
    
 0.605
LOC111566500
TUB like protein 4b; Belongs to the TUB family.
      
 0.594
LOC111582511
CREB binding protein b.
    
 0.578
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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