Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000004657Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
ENSAOCP00000022568
Uncharacterized protein.
 
      0.721
ccdc115
Coiled-coil domain containing 115.
    
 0.520
LOC111579187
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.499
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.499
DDRGK1
DDRGK domain containing 1.
    
  0.487
stx5
Syntaxin 5A; Belongs to the syntaxin family.
     
  0.485
pdzd8
PDZ domain containing 8.
   
 
 0.483
LOC111577710
MSP domain-containing protein.
    
 0.428
bcap29
B cell receptor associated protein 29.
   
  0.421
LOC111587982
B cell receptor associated protein 31.
   
  0.421
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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