gjb7 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000004768	ENSAOCP00000017694	ENSAOCP00000004768	ENSAOCP00000017694	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.615
ENSAOCP00000004768	ENSAOCP00000028676	ENSAOCP00000004768	ENSAOCP00000028676	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.643
ENSAOCP00000004768	GJE1	ENSAOCP00000004768	ENSAOCP00000017241	Connexin 35.4.	Connexin 23.	0.635
ENSAOCP00000004768	LOC111564335	ENSAOCP00000004768	ENSAOCP00000002459	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.546
ENSAOCP00000004768	LOC111574283	ENSAOCP00000004768	ENSAOCP00000023389	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.579
ENSAOCP00000004768	LOC111581084	ENSAOCP00000004768	ENSAOCP00000008706	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.580
ENSAOCP00000004768	LOC111585045	ENSAOCP00000004768	ENSAOCP00000022232	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.578
ENSAOCP00000004768	gja5	ENSAOCP00000004768	ENSAOCP00000004627	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.579
ENSAOCP00000004768	gjb7	ENSAOCP00000004768	ENSAOCP00000004675	Connexin 35.4.	Connexin 28.8.	0.579
ENSAOCP00000004768	gjc2	ENSAOCP00000004768	ENSAOCP00000029939	Connexin 35.4.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.586
ENSAOCP00000017694	ENSAOCP00000004768	ENSAOCP00000017694	ENSAOCP00000004768	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Connexin 35.4.	0.615
ENSAOCP00000017694	ENSAOCP00000028676	ENSAOCP00000017694	ENSAOCP00000028676	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.704
ENSAOCP00000017694	GJE1	ENSAOCP00000017694	ENSAOCP00000017241	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Connexin 23.	0.607
ENSAOCP00000017694	LOC111564335	ENSAOCP00000017694	ENSAOCP00000002459	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.615
ENSAOCP00000017694	LOC111574283	ENSAOCP00000017694	ENSAOCP00000023389	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.605
ENSAOCP00000017694	LOC111581084	ENSAOCP00000017694	ENSAOCP00000008706	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.606
ENSAOCP00000017694	LOC111585045	ENSAOCP00000017694	ENSAOCP00000022232	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.731
ENSAOCP00000017694	gja5	ENSAOCP00000017694	ENSAOCP00000004627	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.731
ENSAOCP00000017694	gjb7	ENSAOCP00000017694	ENSAOCP00000004675	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Connexin 28.8.	0.578
ENSAOCP00000017694	gjc2	ENSAOCP00000017694	ENSAOCP00000029939	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.707