Wdr17 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000022609	LOC111577651	ENSAOCP00000022609	ENSAOCP00000023969	Uncharacterized protein.	Transcription initiation factor TFIID subunit.	0.427
ENSAOCP00000022609	LOC111586237	ENSAOCP00000022609	ENSAOCP00000007997	Uncharacterized protein.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.428
ENSAOCP00000022609	Wdr17	ENSAOCP00000022609	ENSAOCP00000004733	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.937
ENSAOCP00000022609	ift140	ENSAOCP00000022609	ENSAOCP00000012317	Uncharacterized protein.	Intraflagellar transport 140 homolog (Chlamydomonas).	0.427
ENSAOCP00000022609	mad2l1	ENSAOCP00000022609	ENSAOCP00000019428	Uncharacterized protein.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.439
ENSAOCP00000022609	mysm1	ENSAOCP00000022609	ENSAOCP00000015005	Uncharacterized protein.	Myb-like, SWIRM and MPN domains 1.	0.470
ENSAOCP00000022609	pes1	ENSAOCP00000022609	ENSAOCP00000005336	Uncharacterized protein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.452
ENSAOCP00000022609	taf10	ENSAOCP00000022609	ENSAOCP00000023251	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.427
ENSAOCP00000022609	taf12	ENSAOCP00000022609	ENSAOCP00000030155	Uncharacterized protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.434
ENSAOCP00000022609	tex10	ENSAOCP00000022609	ENSAOCP00000014545	Uncharacterized protein.	Testis expressed 10.	0.457
LOC111577651	ENSAOCP00000022609	ENSAOCP00000023969	ENSAOCP00000022609	Transcription initiation factor TFIID subunit.	Uncharacterized protein.	0.427
LOC111577651	LOC111586237	ENSAOCP00000023969	ENSAOCP00000007997	Transcription initiation factor TFIID subunit.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.996
LOC111577651	Wdr17	ENSAOCP00000023969	ENSAOCP00000004733	Transcription initiation factor TFIID subunit.	WD_REPEATS_REGION domain-containing protein.	0.427
LOC111577651	taf10	ENSAOCP00000023969	ENSAOCP00000023251	Transcription initiation factor TFIID subunit.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.996
LOC111577651	taf12	ENSAOCP00000023969	ENSAOCP00000030155	Transcription initiation factor TFIID subunit.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
LOC111586237	ENSAOCP00000022609	ENSAOCP00000007997	ENSAOCP00000022609	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.428
LOC111586237	LOC111577651	ENSAOCP00000007997	ENSAOCP00000023969	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit.	0.996
LOC111586237	Wdr17	ENSAOCP00000007997	ENSAOCP00000004733	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	WD_REPEATS_REGION domain-containing protein.	0.428
LOC111586237	taf10	ENSAOCP00000007997	ENSAOCP00000023251	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
LOC111586237	taf12	ENSAOCP00000007997	ENSAOCP00000030155	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999