STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem223Transmembrane protein 223. (238 aa)    
Predicted Functional Partners:
tmem147
Transmembrane protein 147.
   
  
 0.636
tmem53
Transmembrane protein 53.
      
 0.597
smim4
Small integral membrane protein 4.
   
  
 0.589
tmem101
Transmembrane protein 101.
   
  
 0.582
tmem154
Uncharacterized protein.
      
 0.532
tmem38a
Transmembrane protein 38A.
      
 0.482
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
      
 0.420
nt5dc2
5'-nucleotidase domain containing 2.
      
 0.418
gatad1
GATA zinc finger domain containing 1.
      
 0.416
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.