STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD2LProgrammed cell death 2 like. (410 aa)    
Predicted Functional Partners:
prmt3
Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.815
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.781
Wdpcp
WD repeat containing planar cell polarity effector.
    
 
 0.641
znf277
Zinc finger protein 277.
   
 
 0.641
ENSAOCP00000005734
Mitochondrial ribosomal protein S5.
    
 
 0.620
bysl
Bystin-like.
   
  
 0.615
pabpn1
Poly(A) binding protein, nuclear 1.
      
 0.596
pno1
Partner of NOB1 homolog.
   
  
 0.497
ltv1
LTV1 ribosome biogenesis factor.
   
  
 0.493
rpl4
Ribosomal protein L4.
    
 
 0.491
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.