STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000004811DM domain-containing protein. (226 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.707
depdc5
DEP domain containing 5.
   
 0.678
wdr59
WD repeat domain 59.
    
 0.668
wdr24
WD repeat domain 24.
    
 0.666
ENSAOCP00000016926
Uncharacterized protein.
    
 0.616
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.616
LOC111580047
Uncharacterized protein.
    
 0.597
LOC111585421
NPR2 like, GATOR1 complex subunit.
    
 0.597
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.558
LOC111580627
Uncharacterized protein.
    
 0.558
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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