STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111573541Uncharacterized protein; Belongs to the synaptobrevin family. (219 aa)    
Predicted Functional Partners:
bet1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.994
stx5
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.992
gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.991
stx18
Syntaxin 18.
   
 0.989
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.987
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.981
LOC111586969
BCL2 interacting protein 1b.
    
 0.942
LOC111588049
BCL2 interacting protein 1a.
    
 0.942
LOC111583446
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
  
  
 
0.901
LOC111585572
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
  
  
 
0.900
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.