Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000004863Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
ENSAOCP00000027294
Phospholipase A(2).
      
 0.881
dnaaf4
Dynein axonemal assembly factor 4.
    
 0.637
tsnax
Translin-associated factor X.
      
 0.551
bard1
BRCA1 associated RING domain 1.
   
 0.547
fpgt
Fucose-1-phosphate guanylyltransferase.
    
 0.438
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.427
afdn
Afadin, adherens junction formation factor a.
    
 
 0.423
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.421
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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