Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111584512Si:dkey-208k4.2. (367 aa)    
Predicted Functional Partners:
gtf3c1
B-block_TFIIIC domain-containing protein.
    
 0.827
bdp1
SANT domain-containing protein.
    
 0.778
brf1
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 0.739
LOC111569174
TFIIB-type domain-containing protein.
   
 0.739
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 
 0.722
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.695
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 0.669
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.660
gtf3c5
General transcription factor IIIC, polypeptide 5.
    
 0.655
POC1A
POC1 centriolar protein A.
    
 0.640
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.