Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111574319Neurofilament, light polypeptide b; Belongs to the intermediate filament family. (638 aa)    
Predicted Functional Partners:
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.699
LOC111588202
Parvalbumin 7; Belongs to the parvalbumin family.
    
 
 0.632
s100b
S100 calcium binding protein, beta (neural); Belongs to the S-100 family.
   
 
 0.619
GAN
Gigaxonin.
    
 
 0.591
ENSAOCP00000029546
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.582
LOC111572990
Neural cell adhesion molecule 1b.
   
 0.575
dctn1
Dynactin 1a.
    
 
 0.543
Asph
Un-named hu7910.
   
 
 0.534
LOC111585824
Uncharacterized protein.
   
  0.530
LOC111571550
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
  0.530
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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