LOC111571372 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111571372	LOC111573208	ENSAOCP00000005063	ENSAOCP00000016632	Heterogeneous nuclear ribonucleoprotein M.	RRM domain-containing protein.	0.992
LOC111571372	LOC111576683	ENSAOCP00000005063	ENSAOCP00000000971	Heterogeneous nuclear ribonucleoprotein M.	RRM domain-containing protein.	0.992
LOC111571372	LOC111582566	ENSAOCP00000005063	ENSAOCP00000002195	Heterogeneous nuclear ribonucleoprotein M.	Uncharacterized protein.	0.984
LOC111571372	LOC111585791	ENSAOCP00000005063	ENSAOCP00000002951	Heterogeneous nuclear ribonucleoprotein M.	Heterogeneous nuclear ribonucleoprotein K, like.	0.997
LOC111571372	cdc5l	ENSAOCP00000005063	ENSAOCP00000008360	Heterogeneous nuclear ribonucleoprotein M.	CDC5 cell division cycle 5-like (S. pombe).	0.913
LOC111571372	hnrnpa3	ENSAOCP00000005063	ENSAOCP00000020196	Heterogeneous nuclear ribonucleoprotein M.	Heterogeneous nuclear ribonucleoprotein A3.	0.984
LOC111571372	hnrnpk	ENSAOCP00000005063	ENSAOCP00000017672	Heterogeneous nuclear ribonucleoprotein M.	Heterogeneous nuclear ribonucleoprotein K.	0.997
LOC111571372	hnrnpu	ENSAOCP00000005063	ENSAOCP00000027157	Heterogeneous nuclear ribonucleoprotein M.	Heterogeneous nuclear ribonucleoprotein Ub.	0.983
LOC111571372	rbmx	ENSAOCP00000005063	ENSAOCP00000030183	Heterogeneous nuclear ribonucleoprotein M.	RNA binding motif protein X-linked.	0.990
LOC111571372	znf207	ENSAOCP00000005063	ENSAOCP00000023611	Heterogeneous nuclear ribonucleoprotein M.	Zinc finger protein 207.	0.910
LOC111573208	LOC111571372	ENSAOCP00000016632	ENSAOCP00000005063	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.992
LOC111573208	LOC111576683	ENSAOCP00000016632	ENSAOCP00000000971	RRM domain-containing protein.	RRM domain-containing protein.	0.901
LOC111573208	LOC111582566	ENSAOCP00000016632	ENSAOCP00000002195	RRM domain-containing protein.	Uncharacterized protein.	0.979
LOC111573208	LOC111585791	ENSAOCP00000016632	ENSAOCP00000002951	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K, like.	0.991
LOC111573208	cdc5l	ENSAOCP00000016632	ENSAOCP00000008360	RRM domain-containing protein.	CDC5 cell division cycle 5-like (S. pombe).	0.456
LOC111573208	hnrnpa3	ENSAOCP00000016632	ENSAOCP00000020196	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein A3.	0.979
LOC111573208	hnrnpk	ENSAOCP00000016632	ENSAOCP00000017672	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.991
LOC111573208	hnrnpu	ENSAOCP00000016632	ENSAOCP00000027157	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein Ub.	0.977
LOC111573208	rbmx	ENSAOCP00000016632	ENSAOCP00000030183	RRM domain-containing protein.	RNA binding motif protein X-linked.	0.991
LOC111576683	LOC111571372	ENSAOCP00000000971	ENSAOCP00000005063	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.992