Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abl1Tyrosine-protein kinase. (1121 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
    
 0.979
LOC111562712
CRK proto-oncogene, adaptor protein.
    
 0.972
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
0.972
LOC111575126
Uncharacterized protein.
    
 0.972
atm
Non-specific serine/threonine protein kinase.
    
 0.952
LOC111588082
Abl-interactor 1b.
    
 0.924
ABI1
Abl-interactor 1a.
    
 0.924
abl2
Tyrosine-protein kinase.
  
  
 
0.903
LOC111582989
Docking protein 1b.
    
 0.880
LOC111576864
Si:ch211-168d1.3.
    
 
 0.848
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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