Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efcab1EF-hand calcium binding domain 1. (215 aa)    
Predicted Functional Partners:
cunh4orf47
Zgc:153146.
    
 
 0.981
ttc25
Tetratricopeptide repeat domain 25.
   
 0.981
iqub
IQ motif and ubiquitin domain containing.
   
 0.980
armc3
Armadillo repeat containing 3.
   
 
 0.964
armc4
Armadillo repeat containing 4.
   
 
 0.956
LOC111588031
Coiled-coil domain containing 114.
    
 
 0.956
cunh5orf49
Si:dkeyp-46h3.1.
    
 
 0.953
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.947
efhb
EF-hand domain family, member B.
   
 
 0.941
ccdc96
Coiled-coil domain containing 96.
    
 0.940
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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