STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc6a15Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (738 aa)    
Predicted Functional Partners:
slc30a9
Solute carrier family 30 member 9.
  
  
 0.715
LOC111567511
Solute carrier family 43 member 3a.
      
 0.610
SLC43A3
Solute carrier family 43 member 3b.
      
 0.610
SLC39A12
Solute carrier family 39 member 12.
  
  
 0.606
slc39a4
Uncharacterized protein.
  
  
 0.606
slc3a1
Solute carrier family 3 member 1.
   
 
 0.597
LOC111575452
Annexin.
      
 0.506
anxa2
Annexin.
      
 0.506
sertad4
SERTA domain containing 4.
      
 0.479
slc43a1
Solute carrier family 43 member 1a.
      
 0.450
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.