mybbp1a protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000012285	LOC111576201	ENSAOCP00000012285	ENSAOCP00000018025	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.494
ENSAOCP00000012285	LOC111581044	ENSAOCP00000012285	ENSAOCP00000026965	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.410
ENSAOCP00000012285	LOC111583252	ENSAOCP00000012285	ENSAOCP00000002786	Uncharacterized protein.	BP28CT domain-containing protein.	0.899
ENSAOCP00000012285	mybbp1a	ENSAOCP00000012285	ENSAOCP00000005085	Uncharacterized protein.	MYB binding protein (P160) 1a.	0.955
ENSAOCP00000012285	polr1a	ENSAOCP00000012285	ENSAOCP00000027952	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.945
ENSAOCP00000012285	polr1b	ENSAOCP00000012285	ENSAOCP00000001280	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.841
ENSAOCP00000012285	pum3	ENSAOCP00000012285	ENSAOCP00000001450	Uncharacterized protein.	Pumilio RNA-binding family member 3.	0.782
ENSAOCP00000012285	utp4	ENSAOCP00000012285	ENSAOCP00000004841	Uncharacterized protein.	UTP4 small subunit processome component.	0.992
LOC111576201	ENSAOCP00000012285	ENSAOCP00000018025	ENSAOCP00000012285	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Uncharacterized protein.	0.494
LOC111576201	LOC111581044	ENSAOCP00000018025	ENSAOCP00000026965	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.969
LOC111576201	LOC111583252	ENSAOCP00000018025	ENSAOCP00000002786	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	BP28CT domain-containing protein.	0.494
LOC111576201	baz1b	ENSAOCP00000018025	ENSAOCP00000025507	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Bromodomain adjacent to zinc finger domain, 1B.	0.973
LOC111576201	mybbp1a	ENSAOCP00000018025	ENSAOCP00000005085	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	MYB binding protein (P160) 1a.	0.981
LOC111576201	polr1a	ENSAOCP00000018025	ENSAOCP00000027952	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.765
LOC111576201	polr1b	ENSAOCP00000018025	ENSAOCP00000001280	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.751
LOC111576201	pum3	ENSAOCP00000018025	ENSAOCP00000001450	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Pumilio RNA-binding family member 3.	0.553
LOC111576201	sf3b1	ENSAOCP00000018025	ENSAOCP00000020385	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Splicing factor 3b, subunit 1.	0.976
LOC111576201	utp4	ENSAOCP00000018025	ENSAOCP00000004841	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	UTP4 small subunit processome component.	0.427
LOC111581044	ENSAOCP00000012285	ENSAOCP00000026965	ENSAOCP00000012285	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Uncharacterized protein.	0.410
LOC111581044	LOC111576201	ENSAOCP00000026965	ENSAOCP00000018025	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.969