Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccz1CCZ1 homolog, vacuolar protein trafficking and biogenesis associated. (480 aa)    
Predicted Functional Partners:
LOC111585428
MON1 secretory trafficking family member Bb.
    
 0.994
mon1a
MON1 secretory trafficking family member A.
    
 0.994
LOC111588772
RAB7a, member RAS oncogene family.
    
 0.990
LOC111566639
Uncharacterized protein.
    
 0.990
LOC111573968
Si:dkey-13a21.4.
    
 0.981
rmc1
Regulator of MON1-CCZ1.
    
 0.976
vps11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
   
 
 0.955
vps18
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.954
vps39
VPS39 subunit of HOPS complex.
    
 
 0.954
vps16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.953
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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