Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc23lTetratricopeptide repeat domain 23. (464 aa)    
Predicted Functional Partners:
Iqce
Uncharacterized protein.
    
 
 0.928
efcab7
EF-hand calcium binding domain 7.
    
 
 0.874
fam92a
Family with sequence similarity 92 member A1.
      
 0.707
txndc15
Thioredoxin domain containing 15.
      
 0.705
ENSAOCP00000022318
Pyroglutamyl-peptidase I like.
      
 0.633
dph1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
      
 0.616
ints10
Integrator complex subunit 10.
      
 0.614
armc9
Armadillo repeat containing 9.
      
 0.544
LOC111577238
Integrator complex subunit 6 like.
      
 0.531
ints6
Integrator complex subunit 6.
      
 0.531
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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