Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111575369Uncharacterized protein; Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.583
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
   
 0.536
ENSAOCP00000030355
Uncharacterized protein.
   
 0.536
ak9
Adenylate kinase 9.
    
 
 0.535
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.501
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.501
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.480
phkg1
Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.
   
 0.431
phkg2
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
   
 0.431
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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