LOC111567837 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111567837

Odorant receptor, family H, subfamily 129, member 1. (298 aa)

Predicted Functional Partners:

naa25

0.513

LOC111566426

0.454

LOC111577064

0.416

ost4

0.416

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111566426	LOC111567837	ENSAOCP00000012421	ENSAOCP00000005224	Immunoglobulin-like domain containing receptor 1a.	Odorant receptor, family H, subfamily 129, member 1.	0.454
LOC111566426	naa25	ENSAOCP00000012421	ENSAOCP00000008353	Immunoglobulin-like domain containing receptor 1a.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.416
LOC111567837	LOC111566426	ENSAOCP00000005224	ENSAOCP00000012421	Odorant receptor, family H, subfamily 129, member 1.	Immunoglobulin-like domain containing receptor 1a.	0.454
LOC111567837	LOC111577064	ENSAOCP00000005224	ENSAOCP00000002450	Odorant receptor, family H, subfamily 129, member 1.	FXYD domain-containing ion transport regulator; Belongs to the FXYD family.	0.416
LOC111567837	naa25	ENSAOCP00000005224	ENSAOCP00000008353	Odorant receptor, family H, subfamily 129, member 1.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.513
LOC111567837	ost4	ENSAOCP00000005224	ENSAOCP00000028288	Odorant receptor, family H, subfamily 129, member 1.	Oligosaccharyltransferase complex subunit 4 (non-catalytic).	0.416
LOC111577064	LOC111567837	ENSAOCP00000002450	ENSAOCP00000005224	FXYD domain-containing ion transport regulator; Belongs to the FXYD family.	Odorant receptor, family H, subfamily 129, member 1.	0.416
LOC111577064	naa25	ENSAOCP00000002450	ENSAOCP00000008353	FXYD domain-containing ion transport regulator; Belongs to the FXYD family.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.416
naa25	LOC111566426	ENSAOCP00000008353	ENSAOCP00000012421	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	Immunoglobulin-like domain containing receptor 1a.	0.416
naa25	LOC111567837	ENSAOCP00000008353	ENSAOCP00000005224	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	Odorant receptor, family H, subfamily 129, member 1.	0.513
naa25	LOC111577064	ENSAOCP00000008353	ENSAOCP00000002450	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	FXYD domain-containing ion transport regulator; Belongs to the FXYD family.	0.416
naa25	ost4	ENSAOCP00000008353	ENSAOCP00000028288	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	Oligosaccharyltransferase complex subunit 4 (non-catalytic).	0.416
ost4	LOC111567837	ENSAOCP00000028288	ENSAOCP00000005224	Oligosaccharyltransferase complex subunit 4 (non-catalytic).	Odorant receptor, family H, subfamily 129, member 1.	0.416
ost4	naa25	ENSAOCP00000028288	ENSAOCP00000008353	Oligosaccharyltransferase complex subunit 4 (non-catalytic).	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.416