STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574330Gamma-glutamyltransferase 1a. (574 aa)    
Predicted Functional Partners:
gss
Glutathione synthetase.
   
 
 0.952
oplah
5-oxoprolinase, ATP-hydrolysing.
    
 0.921
LOC111563780
Uncharacterized protein.
     
 0.920
ggct
Gamma-glutamylcyclotransferase b.
     
 0.920
gclc
Glutamate-cysteine ligase, catalytic subunit.
   
 
 0.920
LOC111564703
Zgc:152830.
   
 
 0.916
gsr
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.915
lap3
Leucine aminopeptidase 3.
     
 0.915
gclm
Glutamate-cysteine ligase, modifier subunit.
   
 
 0.913
prdx6
Peroxiredoxin 6.
  
 
 0.912
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.