tnip1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111570277	LOC111586342	ENSAOCP00000016017	ENSAOCP00000005702	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	Uncharacterized protein.	0.504
LOC111570277	optn	ENSAOCP00000016017	ENSAOCP00000030388	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	Optineurin.	0.949
LOC111570277	rb1cc1	ENSAOCP00000016017	ENSAOCP00000016285	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	RB1-inducible coiled-coil 1.	0.824
LOC111570277	tax1bp1	ENSAOCP00000016017	ENSAOCP00000001040	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	Tax1 (human T-cell leukemia virus type I) binding protein 1b.	0.902
LOC111570277	tnfaip3	ENSAOCP00000016017	ENSAOCP00000003660	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	Tumor necrosis factor, alpha-induced protein 3.	0.966
LOC111570277	tnip1	ENSAOCP00000016017	ENSAOCP00000005250	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	TNFAIP3 interacting protein 1.	0.743
LOC111570277	traf6	ENSAOCP00000016017	ENSAOCP00000029129	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.893
LOC111586342	LOC111570277	ENSAOCP00000005702	ENSAOCP00000016017	Uncharacterized protein.	Tax1 (human T-cell leukemia virus type I) binding protein 1a.	0.504
LOC111586342	myd88	ENSAOCP00000005702	ENSAOCP00000022960	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.533
LOC111586342	nfkb1	ENSAOCP00000005702	ENSAOCP00000003039	Uncharacterized protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	0.485
LOC111586342	nfkb2	ENSAOCP00000005702	ENSAOCP00000014273	Uncharacterized protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.485
LOC111586342	optn	ENSAOCP00000005702	ENSAOCP00000030388	Uncharacterized protein.	Optineurin.	0.534
LOC111586342	tax1bp1	ENSAOCP00000005702	ENSAOCP00000001040	Uncharacterized protein.	Tax1 (human T-cell leukemia virus type I) binding protein 1b.	0.641
LOC111586342	tnfaip3	ENSAOCP00000005702	ENSAOCP00000003660	Uncharacterized protein.	Tumor necrosis factor, alpha-induced protein 3.	0.988
LOC111586342	tnip1	ENSAOCP00000005702	ENSAOCP00000005250	Uncharacterized protein.	TNFAIP3 interacting protein 1.	0.962
LOC111586342	traf6	ENSAOCP00000005702	ENSAOCP00000029129	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.746
myd88	LOC111586342	ENSAOCP00000022960	ENSAOCP00000005702	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Uncharacterized protein.	0.533
myd88	nfkb1	ENSAOCP00000022960	ENSAOCP00000003039	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	0.775
myd88	nfkb2	ENSAOCP00000022960	ENSAOCP00000014273	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.775
myd88	tnfaip3	ENSAOCP00000022960	ENSAOCP00000003660	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Tumor necrosis factor, alpha-induced protein 3.	0.509