STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000005302DUF3694 domain-containing protein. (214 aa)    
Predicted Functional Partners:
LOC111585010
Uncharacterized protein.
 
      0.884
LOC111582896
Uncharacterized protein.
 
      0.825
LOC111567728
RAB GTPase activating protein 1-like 2.
 
      0.649
LOC111563004
Uncharacterized protein.
   
  0.607
LOC111576629
Uncharacterized protein.
   
  0.607
LOC111582463
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
  0.607
LOC111565032
RAB6B, member RAS oncogene family a.
    
 0.448
LOC111578795
RAB6B, member RAS oncogene family.
    
 0.448
RAB41
RAB41, member RAS oncogene family.
    
 0.448
LOC111579855
Uncharacterized protein.
    
 0.448
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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